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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE171042
PMID:
34108684
Technique Type:
Protec-seq
Publication:
Spo11 generates gaps through concerted cuts at sites of topological stress
First Author:
Silvia Prieler
Last Author:
Franz Klein
Year:
2021
Journal:
Nature
Access Link:
Samples ( 31 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM5217278-dDSB_spo11Δ_rad50S_t4_ChIP | / | Saccharomyces cerevisiae | / | rad50S | / | / | / | Protec-seq | |
| GSM5217280-dDSB_Spo11-myc18_com1Δ_t4_ChIP | / | Saccharomyces cerevisiae | / | com1Δ | / | / | / | Protec-seq | |
| GSM5217282-dDSB_Spo11-myc18_mre11S_t4_ChIP | / | Saccharomyces cerevisiae | / | mre11S | / | / | / | Protec-seq | |
| GSM5217284-dDSB_Spo11-myc18_mre11S_t4_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | mre11S | / | / | / | Protec-seq | |
| GSM5217286-dDSB_Spo11-myc18_rad50S_t4_ChIP | / | Saccharomyces cerevisiae | / | rad50S | / | / | / | Protec-seq | |
| GSM5217288-dDSB_Spo11-myc18_rad50S_t4_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | rad50S | / | / | / | Protec-seq | |
| GSM5217290-dDSB_Spo11-myc18_rad50S_t6_ChIP | / | Saccharomyces cerevisiae | / | rad50S | / | / | / | Protec-seq | |
| GSM5217292-dDSB_Spo11-myc18_rad50S_t6_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | rad50S | / | / | / | Protec-seq | |
| GSM5217294-dDSB_Spo11-myc18_rad50S_tel1Δ_t4_ChIP | / | Saccharomyces cerevisiae | / | tel1Δ rad50S | / | / | / | Protec-seq | |
| GSM5217296-dDSB_Spo11-myc18_rad50S_tel1Δ_t4_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | tel1Δ rad50S | / | / | / | Protec-seq | |
| GSM5217298-dDSB_Spo11-myc18_Rec104-FRB-HA3_t4_ChIP | / | Saccharomyces cerevisiae | / | Rec104-FRB-HA3 depletion | / | / | / | Protec-seq | |
| GSM5217300-dDSB_Spo11-myc18_Rec104-FRB-HA3_t4_5_+_Rapamycin_t4_ChIP | / | Saccharomyces cerevisiae | Rapamycin | Rec104-FRB-HA3 depletion | / | / | / | Protec-seq | |
| GSM5217302-dDSB_Spo11-myc18_Rec104-FRB-HA3_rad50S_t4_ChIP | / | Saccharomyces cerevisiae | / | Rec104-FRB-HA3 depletion | / | / | / | Protec-seq | |
| GSM5217304-dDSB_Spo11-myc18_Rec104-FRB-HA3_rad50S_t4_5_+_Rapamycin_t4_ChIP | / | Saccharomyces cerevisiae | Rapamycin | Rec104-FRB-HA3 depletion | / | / | / | Protec-seq | |
| GSM5217306-dDSB_Spo11-myc18_Rec104-FRB-HA3_rad50S_t5_ChIP | / | Saccharomyces cerevisiae | / | Rec104-FRB-HA3 depletion | / | / | / | Protec-seq | |
| GSM5217308-dDSB_Spo11-myc18_Rec104-FRB-HA3_rad50S_t5_+_Rapamycin_t4_ChIP | / | Saccharomyces cerevisiae | Rapamycin | Rec104-FRB-HA3 depletion | / | / | / | Protec-seq | |
| GSM5217310-dDSB_Spo11-myc18_rec114-8A_rad50S_t4_ChIP | / | Saccharomyces cerevisiae | / | rad50S rec114-8A | / | / | / | Protec-seq | |
| GSM5217312-dDSB_Spo11-myc18_rec114-8A_rad50S_t4_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | rad50S rec114-8A | / | / | / | Protec-seq | |
| GSM5217314-dDSB_Spo11-myc18_rec114-8A_tel1Δ_t4_ChIP | / | Saccharomyces cerevisiae | / | tel1Δ rec114-8A | / | / | / | Protec-seq | |
| GSM5217316-dDSB_Spo11-myc18_tel1Δ_t4_ChIP | / | Saccharomyces cerevisiae | / | tel1Δ | / | / | / | Protec-seq | |
| GSM5217318-dDSB_Spo11-myc18_tel1Δ_t4_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | tel1Δ | / | / | / | Protec-seq | |
| GSM5217320-dDSB_Spo11-myc18_wt_t3_5_ChIP | / | Saccharomyces cerevisiae | / | WT | / | / | / | Protec-seq | |
| GSM5217322-dDSB_Spo11-myc18_wt_t3_5_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | WT | / | / | / | Protec-seq | |
| GSM5217324-dDSB_Spo11-myc18_wt_t4_ChIP | / | Saccharomyces cerevisiae | / | WT | / | / | / | Protec-seq | |
| GSM5217326-dDSB_Spo11-myc18_wt_t4_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | WT | / | / | / | Protec-seq | |
| GSM5217328-dDSB_Spo11-myc18_wt_t4_replicate_2_ChIP | / | Saccharomyces cerevisiae | / | WT | / | / | / | Protec-seq | |
| GSM5217330-dDSB_Spo11-myc18_wt_t5_ChIP | / | Saccharomyces cerevisiae | / | WT | / | / | / | Protec-seq | |
| GSM5217332-dDSB_Spo11-myc18_wt_t5_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | WT | / | / | / | Protec-seq | |
| GSM5217334-dDSB_Spo11-myc18_wt_t6_ChIP | / | Saccharomyces cerevisiae | / | WT | / | / | / | Protec-seq | |
| GSM5217336-dDSB_spo11Y135F-myc18_rad50S_t4_ChIP | / | Saccharomyces cerevisiae | / | spo11Y135F rad50S | / | / | / | Protec-seq | |
| GSM5217338-dDSB_spo11Y135F-myc18_rad50S_t4_replicate_1_ChIP | / | Saccharomyces cerevisiae | / | spo11Y135F rad50S | / | / | / | Protec-seq |
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