DNA Damage Atlas



Basic Information

Dataset ID:

  GSE121005


PMID:

  30526646


Technique Type:

  AP-seq + OGG1-AP-seq


Publication:

  Genomic landscape of oxidative DNA damage and repair reveals regioselective protection from mutagenesis


First Author:

  Anna R Poetsch


Last Author:

  Nicholas M Luscombe


Year:

  2018


Journal:

  Genome Biology


Access Link:   

Samples ( 24 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
GSM3428220-01_APseq_control_rep1_inputHepG2Homo sapienscontrol////AP-seq
GSM3428221-02_APseq_control_rep2_inputHepG2Homo sapienscontrol////AP-seq
GSM3428222-03_APseq_control_rep3_inputHepG2Homo sapienscontrol////AP-seq
GSM3428223-04_APseq_6Gy_30min_rep1_inputHepG2Homo sapiensX-ray////AP-seq
GSM3428224-05_APseq_6Gy_30min_rep2_inputHepG2Homo sapiensX-ray////AP-seq
GSM3428225-06_APseq_6Gy_30min_rep3_inputHepG2Homo sapiensX-ray////AP-seq
GSM3428226-07_OGG1-APseq_control_rep1_inputHepG2Homo sapienscontrol////OGG1-AP-seq
GSM3428227-08_OGG1-APseq_control_rep2_inputHepG2Homo sapienscontrol////OGG1-AP-seq
GSM3428228-09_OGG1-APseq_control_rep3_inputHepG2Homo sapienscontrol////OGG1-AP-seq
GSM3428229-10_OGG1-APseq_6Gy_30min_rep1_inputHepG2Homo sapiensX-ray////OGG1-AP-seq
GSM3428230-11_OGG1-APseq_6Gy_30min_rep2_inputHepG2Homo sapiensX-ray////OGG1-AP-seq
GSM3428231-12_OGG1-APseq_6Gy_30min_rep3_inputHepG2Homo sapiensX-ray////OGG1-AP-seq
GSM3428232-13_APseq_control_rep1_enrichmentHepG2Homo sapienscontrol////AP-seq
GSM3428233-14_APseq_control_rep2_enrichmentHepG2Homo sapienscontrol////AP-seq
GSM3428234-15_APseq_control_rep3_enrichmentHepG2Homo sapienscontrol////AP-seq
GSM3428235-16_APseq_6Gy_30min_rep1_enrichmentHepG2Homo sapiensX-ray////AP-seq
GSM3428236-17_APseq_6Gy_30min_rep2_enrichmentHepG2Homo sapiensX-ray////AP-seq
GSM3428237-18_APseq_6Gy_30min_rep3_enrichmentHepG2Homo sapiensX-ray////AP-seq
GSM3428238-19_OGG1-APseq_control_rep1_enrichmentHepG2Homo sapienscontrol////OGG1-AP-seq
GSM3428239-20_OGG1-APseq_control_rep2_enrichmentHepG2Homo sapienscontrol////OGG1-AP-seq
GSM3428240-21_OGG1-APseq_control_rep3_enrichmentHepG2Homo sapienscontrol////OGG1-AP-seq
GSM3428241-22_OGG1-APseq_6Gy_30min_rep1_enrichmentHepG2Homo sapiensX-ray////OGG1-AP-seq
GSM3428242-23_OGG1-APseq_6Gy_30min_rep2_enrichmentHepG2Homo sapiensX-ray////OGG1-AP-seq
GSM3428243-24_OGG1-APseq_6Gy_30min_rep3_enrichmentHepG2Homo sapiensX-ray////OGG1-AP-seq


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