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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE166843
PMID:
34939047
Technique Type:
RADD-Seq
Publication:
From single-molecule to genome-wide mapping of DNA lesions: repair-assisted damage detection sequencing
First Author:
Noa Gilat
Last Author:
Yuval Ebenstein
Year:
2021
Journal:
Biophysical Reports
Access Link:
Samples ( 7 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM5086320-Proof-of-concept-raw-BspqPreCRbiotin_ACAGTG_all | U2OS | Homo sapiens | / | / | / | / | Nt.BspQI | RADD-Seq | |
| GSM5086321-Sample_1_U2OS50_KBr_0h_hoGG1_damage | U2OS | Homo sapiens | KBrO3 | / | / | / | / | RADD-Seq | |
| GSM5086322-Sample_3_U2OS50_KBr_1h_hoGG1_damage | U2OS | Homo sapiens | KBrO3 | / | / | / | / | RADD-Seq | |
| GSM5086323-Sample_5_U2OS50_KBr_0h_hoGG1_repair | U2OS | Homo sapiens | KBrO3 + hOGG1 repair | / | / | / | / | RADD-Seq | |
| GSM5086324-Sample_7_U2OS50_KBr_1h_hoGG1_repair | U2OS | Homo sapiens | KBrO3 + hOGG1 repair | / | / | / | / | RADD-Seq | |
| GSM5086325-Sample_9_UsOS50_cont__hoGG1_control | U2OS | Homo sapiens | hoGG1_control | / | / | / | / | RADD-Seq | |
| GSM5086326-Sample_10_UsOS50_cont_control | U2OS | Homo sapiens | / | / | / | / | / | RADD-Seq |
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