DNA Damage Atlas

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 Total Page: 14 Total entries: 263



    

Dataset IDTechnique TypePublicationLast AuthorYearJournalSamples
GSE138846XR-seqDrosophila, which lacks canonical transcription-coupled repair proteins, performs transcription-coupled repairChristopher P Selby2019Journal of Biological Chemistry12
GSE138915ChIPseq + END-seqATM and PRDM9 regulate SPO11-bound recombination intermediates during meiosisAndré Nussenzweig2020Nature Communications30
GSE139011SSiNGLeNovel approach reveals genomic landscapes of single-strand DNA breaks with nucleotide resolution in human cellsPhilipp Kapranov2019Nature Communications109
GSE139289END-seqDual histone methyl reader ZCWPW1 facilitates repair of meiotic double strand breaks in male miceTodd S Macfarlan2020eLife4
GSE140372END-seqSuppressing proteasome mediated processing of topoisomerase II DNA-protein complexes preserves genome integrityAndré Nussenzweig2020eLife35
GSE140635END-seqIntra-Vκ Cluster Recombination Shapes the Ig Kappa Locus RepertoireAndré Nussenzweig2019Cell Reports19
GSE140672HTGTSIntra-Vκ Cluster Recombination Shapes the Ig Kappa Locus RepertoireAndré Nussenzweig2019Cell Reports41
GSE141763ChIP-seqBRD4 Prevents R-Loop Formation and Transcription-Replication Conflicts by Ensuring Efficient Transcription ElongationScott R Floyd2020Cell Reports4
GSE141850ExoT-seq + S1-seqMolecular structures and mechanisms of DNA break processing in mouse meiosisScott Keeney2020Genes & Development33
GSE142289HTGTSInduction of recurrent break cluster genes in neural progenitor cells differentiated from embryonic stem cells in cultureFrederick W Alt2020PANS104
GSE142777LAM-HTGTSCTCF orchestrates long-range cohesin-driven V(D)J recombinational scanningFrederick W Alt2020Nature110
GSE143481EdU-seqinding of the Treslin-MTBP Complex to Specific Regions of the Human Genome Promotes the Initiation of DNA ReplicationWilliam G Dunphy2020Cell Reports9
GSE144072Break-seqINO80C Remodeler Maintains Genomic Stability by Preventing Promiscuous Transcription at Replication OriginsCraig L Peterson2020Cell Reports16
GSE145594sBLISSColibactin DNA-damage signature indicates mutational impact in colorectal cancerThomas F Meyer2020Nature Medicine20
GSE145598sBLISSGenome-wide detection of DNA double-strand breaks by in-suspension BLISSNicola Crosetto2020Nature Protocols10
GSE145768ChIP-seqPRDM9 activity depends on HELLS and promotes local 5-hydroxymethylcytosine enrichmentBernard de Massy2020eLife4
GSE145883XR-seqComparative analyses of two primate species diverged by more than 60 million years show different rates but similar distribution of genome-wide UV repair eventsOgun Adebali2021BMC Genomics6
GSE145911CPD-seqGenome-wide role of Rad26 in promoting transcription-coupled nucleotide excision repair in yeast chromatinPeng Mao2020PANS18
GSE146473XR-seqGenome-wide single-nucleotide resolution of oxaliplatin-DNA adduct repair in drug-sensitive and -resistant colorectal cancer cell linesAziz Sancar2020Journal of Biological Chemistry18
GSE147013OGAP-seqA mechanism for oxidative damage repair at gene regulatory elementsSherif F El-Khamisy2022Nature8

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