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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE142289
PMID:
32332169
Technique Type:
HTGTS
Publication:
Induction of recurrent break cluster genes in neural progenitor cells differentiated from embryonic stem cells in culture
First Author:
Aseda Tena
Last Author:
Frederick W Alt
Year:
2020
Journal:
PANS
Access Link:
Samples ( 104 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM4224496-ESC_line1_Chr7_APH_ExpA | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224497-ESC_line1_Chr7_APH_ExpB | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224498-ESC_line1_Chr7_APH_ExpC | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224499-ESC_line1_Chr7_APH_ExpD | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224500-ESC_line1_Chr7_APH_ExpE | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224501-ESC_line1_Chr7_APH_ExpF | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224502-ESC_line1_Chr7_APH_ExpG | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224503-ESC_line1_Chr7_APH_ExpH | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224504-ESC_line1_Chr7_DMSO_ExpA | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224505-ESC_line1_Chr7_DMSO_ExpB | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224506-ESC_line1_Chr7_DMSO_ExpC | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224507-ESC_line1_Chr7_DMSO_ExpD | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224508-ESC_line1_Chr7_DMSO_ExpE | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224509-ESC_line1_Chr7_DMSO_ExpF | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224510-ESC_line1_Chr7_DMSO_ExpG | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224511-ESC_line1_Chr7_DMSO_ExpH | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224512-ESC_line1_Chr12_APH_ExpA | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224513-ESC_line1_Chr12_APH_ExpB | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224514-ESC_line1_Chr12_APH_ExpC | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224515-ESC_line1_Chr12_APH_ExpD | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224516-ESC_line1_Chr12_DMSO_ExpA | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224517-ESC_line1_Chr12_DMSO_ExpB | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224518-ESC_line1_Chr12_DMSO_ExpC | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224519-ESC_line1_Chr12_DMSO_ExpD | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224520-ESC_line1_Chr15_APH_ExpA | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224521-ESC_line1_Chr15_APH_ExpB | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224522-ESC_line1_Chr15_APH_ExpC | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224523-ESC_line1_Chr15_APH_ExpD | mESC line1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224524-ESC_line1_Chr15_DMSO_ExpA | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224525-ESC_line1_Chr15_DMSO_ExpB | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224526-ESC_line1_Chr15_DMSO_ExpC | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224527-ESC_line1_Chr15_DMSO_ExpD | mESC line1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224528-ESC-NPC_line1_Chr7_APH_ExpA | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224529-ESC-NPC_line1_Chr7_APH_ExpB | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224530-ESC-NPC_line1_Chr7_APH_ExpC | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224531-ESC-NPC_line1_Chr7_APH_ExpD | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224532-ESC-NPC_line1_Chr7_DMSO_ExpA | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224533-ESC-NPC_line1_Chr7_DMSO_ExpB | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224534-ESC-NPC_line1_Chr7_DMSO_ExpC | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224535-ESC-NPC_line1_Chr7_DMSO_ExpD | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224536-ESC-NPC_line1_Chr12_APH_ExpA | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224537-ESC-NPC_line1_Chr12_APH_ExpB | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224538-ESC-NPC_line1_Chr12_APH_ExpC | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224539-ESC-NPC_line1_Chr12_APH_ExpD | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224540-ESC-NPC_line1_Chr12_DMSO_ExpA | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224541-ESC-NPC_line1_Chr12_DMSO_ExpB | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224542-ESC-NPC_line1_Chr12_DMSO_ExpC | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224543-ESC-NPC_line1_Chr12_DMSO_ExpD | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224544-ESC-NPC_line1_Chr15_APH_ExpA | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224545-ESC-NPC_line1_Chr15_APH_ExpB | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224546-ESC-NPC_line1_Chr15_APH_ExpC | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224547-ESC-NPC_line1_Chr15_APH_ExpD | ESC-NPCs line 1 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224548-ESC-NPC_line1_Chr15_DMSO_ExpA | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224549-ESC-NPC_line1_Chr15_DMSO_ExpB | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224550-ESC-NPC_line1_Chr15_DMSO_ExpC | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224551-ESC-NPC_line1_Chr15_DMSO_ExpD | ESC-NPCs line 1 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224552-ESC_line_2_Chr7_APH_ExpA | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224553-ESC_line_2_Chr7_APH_ExpB | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224554-ESC_line_2_Chr7_APH_ExpC | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224555-ESC_line_2_Chr7_APH_ExpD | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224556-ESC_line_2_Chr7_DMSO_ExpA | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224557-ESC_line_2_Chr7_DMSO_ExpB | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224558-ESC_line_2_Chr7_DMSO_ExpC | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224559-ESC_line_2_Chr7_DMSO_ExpD | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224560-ESC_line_2_Chr12_APH_ExpA | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224561-ESC_line_2_Chr12_APH_ExpB | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224562-ESC_line_2_Chr12_APH_ExpC | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224563-ESC_line_2_Chr12_APH_ExpD | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224564-ESC_line_2_Chr12_DMSO_ExpA | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224565-ESC_line_2_Chr12_DMSO_ExpB | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224566-ESC_line_2_Chr12_DMSO_ExpC | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224567-ESC_line_2_Chr12_DMSO_ExpD | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224568-ESC_line_2_Chr15_APH_ExpA | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224569-ESC_line_2_Chr15_APH_ExpB | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224570-ESC_line_2_Chr15_APH_ExpC | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224571-ESC_line_2_Chr15_APH_ExpD | mESC line2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224572-ESC_line_2_Chr15_DMSO_ExpA | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224573-ESC_line_2_Chr15_DMSO_ExpB | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224574-ESC_line_2_Chr15_DMSO_ExpC | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224575-ESC_line_2_Chr15_DMSO_ExpD | mESC line2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224576-ESC-NPC_line_2_Chr7_APH_ExpA | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224577-ESC-NPC_line_2_Chr7_APH_ExpB | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224578-ESC-NPC_line_2_Chr7_APH_ExpC | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224579-ESC-NPC_line_2_Chr7_APH_ExpD | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224580-ESC-NPC_line_2_Chr7_DMSO_ExpA | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224581-ESC-NPC_line_2_Chr7_DMSO_ExpB | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224582-ESC-NPC_line_2_Chr7_DMSO_ExpC | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224583-ESC-NPC_line_2_Chr7_DMSO_ExpD | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr7 HTGTS bait | HTGTS | |
| GSM4224584-ESC-NPC_line_2_Chr12_APH_ExpA | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224585-ESC-NPC_line_2_Chr12_APH_ExpB | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224586-ESC-NPC_line_2_Chr12_APH_ExpC | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224587-ESC-NPC_line_2_Chr12_APH_ExpD | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224588-ESC-NPC_line_2_Chr12_DMSO_ExpA | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224589-ESC-NPC_line_2_Chr12_DMSO_ExpB | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224590-ESC-NPC_line_2_Chr12_DMSO_ExpC | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224591-ESC-NPC_line_2_Chr12_DMSO_ExpD | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr12 HTGTS bait | HTGTS | |
| GSM4224592-ESC-NPC_line_2_Chr15_APH_ExpA | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224593-ESC-NPC_line_2_Chr15_APH_ExpB | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224594-ESC-NPC_line_2_Chr15_APH_ExpC | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224595-ESC-NPC_line_2_Chr15_APH_ExpD | ESC-NPCs line 2 | Mus musculus | Aphidicolin | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224596-ESC-NPC_line_2_Chr15_DMSO_ExpA | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224597-ESC-NPC_line_2_Chr15_DMSO_ExpB | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224598-ESC-NPC_line_2_Chr15_DMSO_ExpC | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS | |
| GSM4224599-ESC-NPC_line_2_Chr15_DMSO_ExpD | ESC-NPCs line 2 | Mus musculus | DMSO | Xrcc4-/- p53-/- | / | / | chr15 HTGTS bait | HTGTS |
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