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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE145594
PMID:
32483361
Technique Type:
sBLISS
Publication:
Colibactin DNA-damage signature indicates mutational impact in colorectal cancer
First Author:
Paulina J Dziubańska-Kusibab
Last Author:
Thomas F Meyer
Year:
2020
Journal:
Nature Medicine
Access Link:
Samples ( 20 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM4322005-Caco-2_no_treatment_rep1 | Caco-2 | Homo sapiens | NT | / | / | / | / | sBLISS | |
| GSM4322006-Caco-2_etoposide_rep1 | Caco-2 | Homo sapiens | Etoposide | / | / | / | / | sBLISS | |
| GSM4322007-Caco-2_pks_plus_E.coli_rep1 | Caco-2 | Homo sapiens | pks+ E.coli infection | / | / | / | / | sBLISS | |
| GSM4322008-Caco-2_pks_minus_E.coli_rep1 | Caco-2 | Homo sapiens | pks- E.coli infection | / | / | / | / | sBLISS | |
| GSM4322009-Caco-2_no_treatment_rep2 | Caco-2 | Homo sapiens | NT | / | / | / | / | sBLISS | |
| GSM4322010-Caco-2_etoposide_rep2 | Caco-2 | Homo sapiens | Etoposide | / | / | / | / | sBLISS | |
| GSM4322011-Caco-2_pks_plus_E.coli_rep2 | Caco-2 | Homo sapiens | pks+ E.coli infection | / | / | / | / | sBLISS | |
| GSM4322012-Caco-2_pks_minus_E.coli_rep2 | Caco-2 | Homo sapiens | pks- E.coli infection | / | / | / | / | sBLISS | |
| GSM4322013-Caco-2_no_treatment_rep3 | Caco-2 | Homo sapiens | NT | / | / | / | / | sBLISS | |
| GSM4322014-Caco-2_etoposide_rep3 | Caco-2 | Homo sapiens | Etoposide | / | / | / | / | sBLISS | |
| GSM4322015-Caco-2_pks_plus_E.coli_rep3 | Caco-2 | Homo sapiens | pks+ E.coli infection | / | / | / | / | sBLISS | |
| GSM4322016-Caco-2_pks_minus_E.coli_rep3 | Caco-2 | Homo sapiens | pks- E.coli infection | / | / | / | / | sBLISS | |
| GSM4322017-Caco-2_no_treatment_tech_rep2 | Caco-2 | Homo sapiens | NT | / | / | / | / | sBLISS | |
| GSM4322018-Caco-2_etoposide_tech_rep2 | Caco-2 | Homo sapiens | Etoposide | / | / | / | / | sBLISS | |
| GSM4322019-Caco-2_pks_plus_E.coli_tech_rep2 | Caco-2 | Homo sapiens | pks+ E.coli infection | / | / | / | / | sBLISS | |
| GSM4322020-Caco-2_pks_minus_E.coli_tech_rep2 | Caco-2 | Homo sapiens | pks- E.coli infection | / | / | / | / | sBLISS | |
| GSM4322021-Caco-2_no_treatment_rep4 | Caco-2 | Homo sapiens | NT | / | / | / | / | sBLISS | |
| GSM4322022-Caco-2_etoposide_rep4 | Caco-2 | Homo sapiens | Etoposide | / | / | / | / | sBLISS | |
| GSM4322023-Caco-2_pks_plus_E.coli_rep4 | Caco-2 | Homo sapiens | pks+ E.coli infection | / | / | / | / | sBLISS | |
| GSM4322024-Caco-2_pks_minus_E.coli_rep4 | Caco-2 | Homo sapiens | pks- E.coli infection | / | / | / | / | sBLISS |
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