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DNA Damage Atlas |
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DNA Damage Atlas |
Basic Information
Dataset ID:
GSE140635
PMID:
31875554
Technique Type:
END-seq
Publication:
Intra-Vκ Cluster Recombination Shapes the Ig Kappa Locus Repertoire
First Author:
Kenta Shinoda
Last Author:
André Nussenzweig
Year:
2019
Journal:
Cell Reports
Access Link:
Samples ( 19 )
| Sample Name | Cell Line/Tissue | Organism | Treatment | Genotype | In-situ Treatment | Cell Phase | Bait/Targeted Break | Technique | fastqc |
| GSM4176056-END_seq_PB_WT_REP1 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176057-END_seq_PB_WT_REP2 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176058-END_seq_PB_WT_REP3 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176059-END_seq_PB_WT_REP4 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176060-END_seq_PB_WT_REP5 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176061-END_seq_PB_WT_REP6 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176062-END_seq_PB_WT_REP7 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176063-END_seq_PB_WT_REP8 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176064-END_seq_PB_WT_REP9 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176065-END_seq_PB_WT_REP10 | Abel pre-B cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176066-END_seq_PB_DELJK_REP1 | Abel pre-B cell | Mus musculus | / | ΔJκ | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176067-END_seq_PB_DELJK_REP2 | Abel pre-B cell | Mus musculus | / | ΔJκ | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176068-END_seq_PB_DELJK_REP3 | Abel pre-B cell | Mus musculus | / | ΔJκ | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176069-END_seq_PB_RAG1 | Abel pre-B cell | Mus musculus | / | RAG1-/- | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176070-END_seq_PB_DELJK_RS_REP1 | Abel pre-B cell | Mus musculus | / | ΔJκ-RS | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176071-END_seq_PB_DELJK_RS_REP2 | Abel pre-B cell | Mus musculus | / | ΔJκ-RS | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176072-END_seq_PB_DELJK_RS_REP3 | Abel pre-B cell | Mus musculus | / | ΔJκ-RS | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176073-END_seq_BMPB_BCL2TG | Primary BM pre-B cell | Mus musculus | / | Bcl2 Tg | Exo VII + Exo T | G1 | / | END-seq | |
| GSM4176074-END_seq_THY | Primary T cell | Mus musculus | / | WT | Exo VII + Exo T | G1 | / | END-seq |
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