DNA Damage Atlas



Basic Information

Dataset ID:

  GSE149760


PMID:

  34108663


Technique Type:

  TCR-seq


Publication:

  ELOF1 is a transcription-coupled DNA repair factor that directs RNA polymerase II ubiquitylation


First Author:

  Yana van der Weegen


Last Author:

  Martijn S Luijsterburg


Year:

  2021


Journal:

  Nature Cell Biology


Access Link:   

Samples ( 51 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
GSM4511924-DataTOgi_WTrep1_mock_SSPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511925-DataTOgi_WTrep2_mock_SSPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511926-DataTOgi_WTrep1_1h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511927-DataTOgi_WTrep2_1h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511928-DataTOgi_WTrep1_4h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511929-DataTOgi_WTrep2_4h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511930-DataTOgi_WTrep1_8h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511931-DataTOgi_WTrep2_8h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511932-DataTOgi_WTrep1_16h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511933-DataTOgi_WTrep2_16h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511934-DataTOgi_CSBKOrep1_mock_SSPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511935-DataTOgi_CSBKOrep2_mock_SSPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511936-DataTOgi_CSBKOrep1_1h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511937-DataTOgi_CSBKOrep2_1h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511938-DataTOgi_CSBKOrep1_4h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511939-DataTOgi_CSBKOrep2_4h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511940-DataTOgi_CSBKOrep1_8h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511941-DataTOgi_CSBKOrep2_8h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511942-DataTOgi_CSBKOrep1_16h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511943-DataTOgi_CSBKOrep2_16h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCCSB-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511944-DataTOgi_ELOFKOrep1_mock_SSPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511945-DataTOgi_ELOFKOrep2_mock_SSPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511946-DataTOgi_ELOFKOrep1_1h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511947-DataTOgi_ELOFKOrep2_1h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511948-DataTOgi_ELOFKOrep1_4h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511949-DataTOgi_ELOFKOrep2_4h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511950-DataTOgi_ELOFKOrep1_8h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511951-DataTOgi_ELOFKOrep2_8h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511952-DataTOgi_ELOFKOrep1_16h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511953-DataTOgi_ELOFKOrep2_16h_SSPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-RNAPII-S2 clone 3E10)
GSM4511954-WT_input_rep1_SPPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentWT///TCR-seq (Input)
GSM4511955-WT_input_rep2_SSPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentWT///TCR-seq (Input)
GSM4511956-WT_mock_rep1_SPPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentWT///TCR-seq (anti-Pan-RNAPII)
GSM4511957-WT_mock_rep2_SPPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentWT///TCR-seq (anti-Pan-RNAPII)
GSM4511958-WT_UV1h_rep1_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-Pan-RNAPII)
GSM4511959-WT_UV1h_rep2_SSPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-Pan-RNAPII)
GSM4511960-WT_UV_rep1_SPPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-Pan-RNAPII)
GSM4511961-WT_UV_rep2_SPPE_TagDirRPE1-iCas9Homo sapiensUVCWT///TCR-seq (anti-Pan-RNAPII)
GSM4511962-ELOF1_input_rep1_SPPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentELOF1-KO///TCR-seq (Input)
GSM4511963-ELOF1_input_rep2_SSPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentELOF1-KO///TCR-seq (Input)
GSM4511964-ELOF1_mock_rep1_SPPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentELOF1-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511965-ELOF1_mock_rep2_SPPE_TagDirRPE1-iCas9Homo sapiensmock UV teatmentELOF1-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511966-ELOF1_UV1hrs_rep1_SPPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511967-ELOF1_UV1hrs_rep2_SPPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511968-ELOF1_UV_rep1_SPPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511969-ELOF1_UV_rep2_SPPE_TagDirRPE1-iCas9Homo sapiensUVCELOF1-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511970-CSB-KO_mock_1U2OSHomo sapiensmock UV teatmentCSB-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511971-CSB-KO_mock_2U2OSHomo sapiensmock UV teatmentCSB-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511972-CSB-KO_UV_6J8h_1U2OSHomo sapiensUVCCSB-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511973-CSB-KO_UV_6J8h_2U2OSHomo sapiensUVCCSB-KO///TCR-seq (anti-Pan-RNAPII)
GSM4511974-CSB-KO_UV_20J8hU2OSHomo sapiensUVCCSB-KO///TCR-seq (anti-Pan-RNAPII)


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