DNA Damage Atlas



Basic Information

Dataset ID:

  GSE136288


PMID:

  33596418


Technique Type:

  BrdU-seq


Publication:

  Persistence of RNA transcription during DNA replication delays duplication of transcription start sites until G2/M


First Author:

  Jianming Wang


Last Author:

  Marco Saponaro


Year:

  2021


Journal:

  Cell Reports


Access Link:   

Samples ( 24 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
GSM4044019-BrdU-Seq_Inputskin; foreskinHomo sapiens/////BrdU-seq
GSM4044020-BrdU-Seq_16hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044021-BrdU-Seq_19hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044022-BrdU-Seq_22hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044023-BrdU-Seq_24hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044024-BrdU-Seq_28hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044025-BrdU-Seq_2_Inputskin; foreskinHomo sapiens/////BrdU-seq
GSM4044026-BrdU-Seq_2_16hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044027-BrdU-Seq_2_19hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044028-BrdU-Seq_2_22hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044029-BrdU-Seq_2_24hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044030-BrdU-Seq_2_28hskin; foreskinHomo sapiensNocodazole////BrdU-seq
GSM4044031-BrdU-Seq_Early_S_SUPT5H_siRNAskin; foreskinHomo sapiens16h timepoint siGENOME Human SUPT5H siRNA Pool//Early S/BrdU-seq
GSM4044032-BrdU-Seq_Early_S_NELFA_siRNAskin; foreskinHomo sapiens16h timepoint siGENOME Human NELFA siRNA Pool//Early S/BrdU-seq
GSM4044033-BrdU-Seq_Early_S_con_siRNAskin; foreskinHomo sapiens16h timepoint siGENOME Non-Targeting siRNA Pool #2//Early S/BrdU-seq
GSM4044034-BrdU-Seq_Early_S_Inputskin; foreskinHomo sapiens///Early S/BrdU-seq
GSM4044035-BrdU-Seq_Early_S_2_SUPT5H_siRNAskin; foreskinHomo sapiens16h timepoint repeat 2 siGENOME Human SUPT5H siRNA Pool//Early S/BrdU-seq
GSM4044036-BrdU-Seq_Early_S_2_NELFA_siRNAskin; foreskinHomo sapiens16h timepoint repeat 2 siGENOME Human NELFA siRNA Pool//Early S/BrdU-seq
GSM4044037-BrdU-Seq_Early_S_2_con_siRNAskin; foreskinHomo sapiens16h timepoint repeat siGENOME Non-Targeting siRNA Pool #2//Early S/BrdU-seq
GSM4044038-BrdU-Seq_Early_S_2_Inputskin; foreskinHomo sapiens16h timepoint Triptolide treatment//Early S/BrdU-seq
GSM4044039-BrdU-Seq_Early_S_Trip_DMSOskin; foreskinHomo sapiens16h timepoint Triptolide treatment//Early S/BrdU-seq
GSM4044040-BrdU-Seq_Early_S_Trip_50nMskin; foreskinHomo sapiens16h timepoint Triptolide treatment//Early S/BrdU-seq
GSM4044041-BrdU-Seq_Early_S_Trip_100nMskin; foreskinHomo sapiens16h timepoint Triptolide treatment//Early S/BrdU-seq
GSM4044042-BrdU-Seq_Early_S_Trip_200nMskin; foreskinHomo sapiens16h timepoint Triptolide treatment//Early S/BrdU-seq


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