DNA Damage Atlas



Basic Information

Dataset ID:

  GSE99194


PMID:

  28735753


Technique Type:

  END-seq


Publication:

  Genome Organization Drives Chromosome Fragility


First Author:

  Andres Canela


Last Author:

  André Nussenzweig


Year:

  2017


Journal:

  Cell


Access Link:   

Samples ( 32 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
GSM2635560-END_seq_aB12h_ETOActivated primary B cellMus musculusEtoposideWTExo VII + Exo TG1/END-seq
GSM2635561-END_seq_aB12h_NTActivated primary B cellMus musculusNTWTExo VII + Exo TG1/END-seq
GSM2635562-END_seq_aB24h_ETOActivated primary B cellMus musculusEtoposideWTExo VII + Exo TM/END-seq
GSM2635563-END_seq_aB24h_NTActivated primary B cellMus musculusNTWTExo VII + Exo TM/END-seq
GSM2635564-END_seq_DRBexp_aB12h_DRBActivated primary B cellMus musculusDRBWTExo VII + Exo TG1/END-seq
GSM2635565-END_seq_DRBexp_aB12h_ETO_DRBActivated primary B cellMus musculusEtoposide + DRBWTExo VII + Exo TG1/END-seq
GSM2635566-END_seq_DRBexp_aB12h_ETOActivated primary B cellMus musculusEtoposideWTExo VII + Exo TG1/END-seq
GSM2635567-END_seq_DRBexp_aB12h_NTActivated primary B cellMus musculusNTWTExo VII + Exo TG1/END-seq
GSM2635568-END_seq_MCF7_ETOMCF-7Homo sapiensEtoposideWTExo VII + Exo T//END-seq
GSM2635569-END_seq_MCF7_NTMCF-7Homo sapiensNTWTExo VII + Exo T//END-seq
GSM2635570-END_seq_MEF_ETOMEFMus musculusEtoposideWTExo VII + Exo T//END-seq
GSM2635571-END_seq_MEF_NTMEFMus musculusNTWTExo VII + Exo T//END-seq
GSM2635572-END_seq_MEF_top2ko_ETOMEFMus musculusEtoposideTOP2B-/-Exo VII + Exo T//END-seq
GSM2635573-END_seq_MEF_top2ko_NTMEFMus musculusNTTOP2B-/-Exo VII + Exo T//END-seq
GSM2635574-END_seq_Nalm6_ETONalm6Homo sapiensEtoposideWTExo VII + Exo T//END-seq
GSM2635575-END_seq_Nalm6_NTNalm6Homo sapiensNTWTExo VII + Exo T//END-seq
GSM2635576-END_seq_NRN_ETOCortical neuronsMus musculusEtoposideWTExo VII + Exo T//END-seq
GSM2635577-END_seq_NRN_NTCortical neuronsMus musculusNTWTExo VII + Exo T//END-seq
GSM2635578-END_seq_PB_ETOAbel pre-B cellMus musculusEtoposideWTExo VII + Exo TG1/END-seq
GSM2635579-END_seq_PB_NTAbel pre-B cellMus musculusNTWTExo VII + Exo TG1/END-seq
GSM2635580-END_seq_rB_ETOResting primary B cellMus musculusEtoposideWTExo VII + Exo TG0/END-seq
GSM2635581-END_seq_rB_NTResting primary B cellMus musculusNTWTExo VII + Exo TG0/END-seq
GSM2635582-END_seq_Species_Mus_aB12h_ETOActivated primary B cellMus musculusEtoposideWTExo VII + Exo TG1/END-seq
GSM2635583-END_seq_Species_Mus_aB12h_NTActivated primary B cellMus musculusNTWTExo VII + Exo TG1/END-seq
GSM2635584-END_seq_Species_Spr_aB12h_ETOActivated primary B cell-SpretusMus spretusEtoposideWTExo VII + Exo T//END-seq
GSM2635585-END_seq_Species_Spr_aB12h_NTActivated primary B cell-SpretusMus spretusNTWTExo VII + Exo T//END-seq
GSM2635586-END_seq_T_ETOPrimary T cellMus musculusEtoposideWTExo VII + Exo T//END-seq
GSM2635587-END_seq_T_NTPrimary T cellMus musculusNTWTExo VII + Exo T//END-seq
GSM2635588-END_seq_TRPexp_aB12h_ETOActivated primary B cellMus musculusEtoposideWTExo VII + Exo TG1/END-seq
GSM2635589-END_seq_TRPexp_aB12h_ETO_TRIPTOLIDEActivated primary B cellMus musculusEtoposide + TriptolideWTExo VII + Exo TG1/END-seq
GSM2635590-END_seq_TRPexp_aB12h_NTActivated primary B cellMus musculusNTWTExo VII + Exo TG1/END-seq
GSM2635591-END_seq_TRPexp_aB12h_TRIPTOLIDEActivated primary B cellMus musculusTriptolideWTExo VII + Exo TG1/END-seq


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