DNA Damage Atlas



Basic Information

Dataset ID:

  GSE210314


PMID:

  36454826


Technique Type:

  END-seq


Publication:

  Active DNA demethylation promotes cell fate specification and the DNA damage response


First Author:

  Dongpeng Wang


Last Author:

  André Nussenzweig


Year:

  2022


Journal:

  Science


Access Link:   

Samples ( 29 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
GSM6428056-iNeuron_TDGdegron_dTAG_ddC_S1ENDseqiNeuronHomo sapiensdTAG + ddCTDGdegronExo VII + Exo T + S1//END-seq
GSM6428057-iNeuron_TDGdegron_NT_ddC_S1ENDseqiNeuronHomo sapiensddCTDGdegronExo VII + Exo T + S1//END-seq
GSM6428058-iNeuron_WT_controlfor_sgTDG_ddC_S1ENDseqiNeuronHomo sapiensddCWTExo VII + Exo T + S1//END-seq
GSM6428059-iNeuron_sgTDG_ddC_S1ENDseqiNeuronHomo sapiensddCTDG CRISPRiExo VII + Exo T + S1//END-seq
GSM6428060-iNeuron_TDGdegron_dTAG_ddC_S1ENDseq_rep2iNeuronHomo sapiensdTAG + ddCTDGdegronExo VII + Exo T + S1//END-seq
GSM6428061-iNeuron_TDGdegron_NT_ddC_S1ENDseq_rep2iNeuronHomo sapiensddCTDGdegronExo VII + Exo T + S1//END-seq
GSM6428062-iNeuron_WT_controlfor_sgTDG_ddC_S1ENDseq_rep2iNeuronHomo sapiensddCWTExo VII + Exo T + S1//END-seq
GSM6428063-iNeuron_sgTDG_ddC_S1ENDseq_rep2iNeuronHomo sapiensddCTDG CRISPRiExo VII + Exo T + S1//END-seq
GSM6428064-iNeuron_ENDseqiNeuronHomo sapiensNTWTExo VII + Exo T//END-seq
GSM6428065-iNeuron_S1ENDseqiNeuronHomo sapiensNTWTExo VII + Exo T + S1//END-seq
GSM6428066-iNeuron_ddC_ENDseqiNeuronHomo sapiensddCWTExo VII + Exo T//END-seq
GSM6428067-iNeuron_ddC_S1ENDseqiNeuronHomo sapiensddCWTExo VII + Exo T + S1//END-seq
GSM6428068-iNeuron_AraC_S1ENDseqiNeuronHomo sapiensAraCWTExo VII + Exo T + S1//END-seq
GSM6428069-iNeuron_AraA_S1ENDseqiNeuronHomo sapiensAraAWTExo VII + Exo T + S1//END-seq
GSM6428070-iNeuron_ddC_pairedwithAraA_S1ENDseqiNeuronHomo sapiensddCWTExo VII + Exo T + S1//END-seq
GSM6428071-iNeuron_NT_pairedwithAraA_S1ENDseqiNeuronHomo sapiensNTWTExo VII + Exo T + S1//END-seq
GSM6428072-iMacrophage_ddC_S1ENDseqiMacrophageMus musculusAphidicolin + ddCWTExo VII + Exo T + S1//END-seq
GSM6428073-Macrophage_WT_ddC_S1ENDseqiMacrophageMus musculusAphidicolin + ddCWTExo VII + Exo T + S1//END-seq
GSM6428074-iMacrophage_TDGKO_ddC_S1ENDseqiMacrophageMus musculusAphidicolin + ddCTDG-/-Exo VII + Exo T + S1//END-seq
GSM6428075-iMacrophage_ddA_S1ENDseqiMacrophageMus musculusddAWTExo VII + Exo T + S1//END-seq
GSM6428076-iMacrophage_ddC_PairedwithOthers_S1ENDseqiMacrophageMus musculusddCWTExo VII + Exo T + S1//END-seq
GSM6428077-iMacrophage_ddG_S1ENDseqiMacrophageMus musculusddGWTExo VII + Exo T + S1//END-seq
GSM6428078-iMacrophage_ddT_S1ENDseqiMacrophageMus musculusddTWTExo VII + Exo T + S1//END-seq
GSM6428081-iNeuron_ddA_S1ENDseqiNeuronHomo sapiensddAWTExo VII + Exo T + S1//END-seq
GSM6428082-iNeuron_ddT_S1ENDseqiNeuronHomo sapiensddTWTExo VII + Exo T + S1//END-seq
GSM6428083-iNeuron_ddC_paired_withddATG_S1ENDseqiNeuronHomo sapiensddCWTExo VII + Exo T + S1//END-seq
GSM6428084-iNeuron_ddG_S1ENDseqiNeuronHomo sapiensddGWTExo VII + Exo T + S1//END-seq
GSM6428085-iNeuron_POLBKD_ddC_S1ENDseqiNeuronHomo sapiensddCPOLB KDExo VII + Exo T + S1//END-seq
GSM6685233-iMacrophage_oxENDseqiMacrophageMus musculuspyridine boraneTDG-/-Exo VII + Exo T//END-seq


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