DNA Damage Atlas



Basic Information

Dataset ID:

  PRJNA636949


PMID:

  35810156


Technique Type:

  INDUCE-seq


Publication:

  Precision digital mapping of endogenous and induced genomic DNA breaks by INDUCE-seq


First Author:

  Felix M. Dobbs


Last Author:

  Simon H. Reed


Year:

  2022


Journal:

  Nature Communications


Access Link:   

Samples ( 32 )

  Sample Name    Cell Line/Tissue    Organism    Treatment    Genotype    In-situ Treatment    Cell Phase    Bait/Targeted Break    Technique    fastqc  
SRX8461066-INDUCE-seq_HEK293T_in_situ_HindIII_treated293THomo sapiens//HindIII/HindIIIINDUCE-seq
SRX8461067-INDUCE-seq_HEK293T_untreated293THomo sapiensNT////INDUCE-seq
SRX8461068-INDUCE-seq_HEK293_untreated_r3293Homo sapiensNT////INDUCE-seq
SRX8461069-INDUCE-seq_HEK293_untreated_r4293Homo sapiensNT////INDUCE-seq
SRX8461070-INDUCE-seq_HEK293_EMX1_RNP_0h_r1293Homo sapiensRNP nucleofection///EMX1; gRNA sequence: GAGTCCGAGCAGAAGAAGAANGGINDUCE-seq
SRX8461071-INDUCE-seq_HEK293_EMX1_RNP_0h_r2293Homo sapiensRNP nucleofection///EMX1; gRNA sequence: GAGTCCGAGCAGAAGAAGAANGGINDUCE-seq
SRX8461072-INDUCE-seq_HEK293_negative_control_0h_r1293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461073-INDUCE-seq_HEK293_negative_control_0h_r2293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461074-INDUCE-seq_HEK293_EMX1_RNP_7h_r1293Homo sapiensRNP nucleofection///EMX1; gRNA sequence: GAGTCCGAGCAGAAGAAGAANGGINDUCE-seq
SRX8461075-INDUCE-seq_HEK293_EMX1_RNP_7h_r2293Homo sapiensRNP nucleofection///EMX1; gRNA sequence: GAGTCCGAGCAGAAGAAGAANGGINDUCE-seq
SRX8461076-INDUCE-seq_HEK293_negative_control_7h_r1293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461077-INDUCE-seq_HEK293_negative_control_7h_r2293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461078-INDUCE-seq_DivA_induced_r1DiVAHomo sapiens4-Hydroxytamoxifen///AsiSIINDUCE-seq
SRX8461079-INDUCE-seq_HEK293_EMX1_RNP_12h_r1293Homo sapiensRNP nucleofection///EMX1; gRNA sequence: GAGTCCGAGCAGAAGAAGAANGGINDUCE-seq
SRX8461080-INDUCE-seq_HEK293_EMX1_RNP_12h_r2293Homo sapiensRNP nucleofection///EMX1; gRNA sequence: GAGTCCGAGCAGAAGAAGAANGGINDUCE-seq
SRX8461081-INDUCE-seq_HEK293_negative_control_12h_r1293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461082-INDUCE-seq_HEK293_negative_control_12h_r2293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461083-INDUCE-seq_HEK293_EMX1_RNP_24h_r1293Homo sapiensRNP nucleofection///position: chr2:73160982-73161001INDUCE-seq
SRX8461084-INDUCE-seq_HEK293_EMX1_RNP_24h_r2293Homo sapiensRNP nucleofection///position: chr2:73160982-73161001INDUCE-seq
SRX8461085-INDUCE-seq_HEK293_negative_control_24h_r1293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461086-INDUCE-seq_HEK293_negative_control_24h_r2293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461087-INDUCE-seq_HEK293_EMX1_RNP_30h_r1293Homo sapiensRNP nucleofection///EMX1; gRNA sequence: GAGTCCGAGCAGAAGAAGAANGGINDUCE-seq
SRX8461088-INDUCE-seq_HEK293_EMX1_RNP_30h_r2293Homo sapiensRNP nucleofection///EMX1; gRNA sequence: GAGTCCGAGCAGAAGAAGAANGGINDUCE-seq
SRX8461089-INDUCE-seq_DivA_induced_r2DiVAHomo sapiens4-Hydroxytamoxifen///AsiSIINDUCE-seq
SRX8461090-INDUCE-seq_HEK293_negative_control_30h_r1293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461091-INDUCE-seq_HEK293_negative_control_30h_r2293Homo sapiensRNP nucleofection////INDUCE-seq
SRX8461100-INDUCE-seq_DivA_induced_r3DiVAHomo sapiens4-Hydroxytamoxifen///AsiSIINDUCE-seq
SRX8461111-INDUCE-seq_DivA_uninduced_r1DiVAHomo sapiensNT////INDUCE-seq
SRX8461115-INDUCE-seq_DivA_uninduced_r2DiVAHomo sapiensNT////INDUCE-seq
SRX8461116-INDUCE-seq_DivA_uninduced_r3DiVAHomo sapiensNT////INDUCE-seq
SRX8461117-INDUCE-seq_HEK293_untreated_r1293Homo sapiensNT////INDUCE-seq
SRX8461118-INDUCE-seq_HEK293_untreated_r2293Homo sapiensNT////INDUCE-seq


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